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cPlot
A visualized contig plotting application for analysis of short read alignment of nucleotide sequences
Application
cPlot
Results
In progress
0
Finished
0
cPlot
Clear
Input & output
Title
Input files
Reference
Select file...
Query
Select file...
Upload files
Parameters
K-mer
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
Threshold
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
Output file types
PDF(Default)
PS
PNG
SVG
Submit
Display options
Hide
Display
Show title:
Yes
No
Show text:
Yes
No
Show legend:
Yes(outside)
Yes(inside)
No
Show X-axis label:
Yes
No
Show major X-ticks:
Yes
No
Show minor X-ticks:
Yes
No
Show Y-axis label:
Yes
No
Show major Y-ticks:
Yes
No
Show minor Y-ticks:
Yes
No
Axis line
Thickness:
1
2
3
4
5
6
7
8
9
10
Shape:
Solid
Dashed
Dash-dot
Dotted
Color:
Reads line
Thickness:
1
2
3
4
5
6
7
8
9
10
Shape:
Solid
Dashed
Dash-dot
Dotted
Marker
Thickness:
1
2
3
4
5
6
7
8
9
10
Shape:
Point
Pixel
Circle
Octagon
Square
Pentagon
Hexagon
Plus
Plus(filled)
X
X(filled)
Star
Colormap
Merge-step:
Forward
Reverse complement
Optimal-step:
Repeat
Spring
Summer
Winter
Cool
Custom
Use Color of 'Reads line' and 'Marker'
Reads:
Marker:
In progress
Index
Status
Job ID & Elapsed time
Title
Submit date
Finished
Delete
Index
Status
Job ID & Elapsed time
Title
Submit date
URL
Download
Result
Title
Job ID
Date
Data
Reference
Query
Optimal
Rearrange
Parameters
Seed
Threshold
Show title
Show text
Show legend
Show X-axis label
Show major X-ticks
Show minor X-tick
Show Y-axis label
Show major Y-ticks
Show minor Y-tick
Axis thickness
Axis shape
Axis color
Reads thickness
Reads shape
Reads color
Marker thickness
Marker shape
Marker_color
Forward color
Reverse complement color
Optimal colormap
Optimal colormap repeat
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